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Statistics / Bayesian inference · BEGINNER LESSON

Posterior probability

Posterior probability is the probability of a hypothesis or treatment effect after the data have been observed. In Bayesian inference, it updates a prior belief with the observed data to give a data-based probability statement.

What it is

Posterior probability is the updated probability of a hypothesis after observing data. In the sources, it is contrasted with a p value: a p value asks how unusual the data would be if there were no treatment effect, while posterior probability asks how likely there is a treatment effect after seeing the data. This is a Bayesian probability statement, meaning the hypothesis itself is assigned probability, not just the data under a fixed assumption. [0,1,2]

[1] Figure 2 [2] Détente: A Practical Understanding of P values and Bayesian ... - PMC [3] Lecture 16: Bayesian inference (v3) Ramesh Johari ramesh ...

How it is built

Bayesian inference starts with a prior distribution, which summarizes the investigator’s belief before collecting data. The observed data contribute a likelihood, the probability of the data under each possible parameter value. Bayes’ rule combines prior and likelihood to produce the posterior distribution; the posterior probability is then the probability mass in the region of interest, such as values indicating a treatment effect. [0,2]

[1] Figure 2 [3] Lecture 16: Bayesian inference (v3) Ramesh Johari ramesh ...

What it measures in practice

Posterior probability measures how strongly the updated evidence supports a hypothesis, such as the chance that a biased coin was drawn or that a treatment effect exists. The sources note that it can be more intuitive than a p value and can be used to make direct probability statements like “there is a 50% chance” or “there is a 95% chance” about a parameter or effect. [0,1,2]

[1] Figure 2 [2] Détente: A Practical Understanding of P values and Bayesian ... - PMC [3] Lecture 16: Bayesian inference (v3) Ramesh Johari ramesh ...

Limitations and interpretation

Posterior probability depends on the chosen prior, so different prior assumptions can change the result. It also depends on sample size and on how common the observed evidence is under both the null hypothesis and the alternative; for the same p value, the posterior probability of a treatment effect can get smaller in larger studies. The sources also warn that very large studies can produce statistically significant p values for effects that are clinically unimportant. [0,1,2]

[1] Figure 2 [2] Détente: A Practical Understanding of P values and Bayesian ... - PMC [3] Lecture 16: Bayesian inference (v3) Ramesh Johari ramesh ...

SEE THE IDEA

How posterior probability is formed

Prior distribution and observed data are combined through the likelihood to produce the posterior probability.

Bayesian updating turns prior belief plus data into an updated probability statement about the hypothesis.

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0 of 3 questions answered
01 In a Bayesian analysis, what does posterior probability measure?
02 A trial has the same p value of 0.05 in two settings: one with 341 patients per arm and one with 683 per arm. According to the sources, what can happen to the posterior probability of a treatment effect?
03 Which ingredient summarizes belief before data are collected?

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Sources and further reading

This general lesson was generated from public source material. It explains a concept; it does not interpret a private paper or provide medical advice.

  1. Figure 2
  2. Détente: A Practical Understanding of P values and Bayesian ... - PMC
  3. Lecture 16: Bayesian inference (v3) Ramesh Johari ramesh ...
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